00575001_00600000/595137 Index

595137 124630-95-1 5'-GCAGGCAAACCATTTGAATG-3' 5'-GCAGGCAAACCATTTGAA
TG-3' Phosphorothioate (scrambled oligonucleotide) 5'-GCAGGC
AAACCATTTGAATG-3' Phosphorothioate oligodeoxynucleotide (mis
matched) AIDS-000496 AIDS000496 Guanosine, 2'-deoxy-P-thiogu
anylyl-(3'-5')-2'-deoxy-P-thiocytidylyl-(3'-5')-2'-deoxy-P-t
hioadenylyl-(3'-5')-2'-deoxy-P-thioguanylyl-(3'-5')-2'-deoxy
-P-thioguanylyl-(3'-5')-2'-deoxy-P-thiocytidylyl-(3'-5')-2'-
deoxy-P-thioadenylyl-(3'-5')-2'-deoxy-P-thioadenylyl-(3'-5')
-2'-deoxy-P-thioadenylyl-(3'-5')-2'-deoxy-P-thiocytidylyl-(3
'-5)-2'-deoxy-P-thiocytidylyl-(3'-5')-2'-deoxy-P-thioadenyly
l-(3'-5')-P-thiothymidylyl-(3'-5')-P-thiothymidylyl-(3'-5')-
P-thiothymidylyl-(3'-5')-2'-deoxy-P-thioguanylyl-(3'-5')-2'-
deoxy-P-thioadenylyl-(3'-5')-2'-deoxy-P-thioadenylyl-(3'-5')
-P-thiothymidylyl-(3'-5')-2'-deoxy

Smiles: S=P(O)(OCC1OC(CC1OP(=S)(O)OCC2OC(CC2OP(=S)(O)OCC3OC(CC3OP(=S
)(O)OCC4OC(CC4OP(=S)(O)OCC5OC(CC5OP(=S)(O)OCC6OC(CC6OP(=S)(O
)OCC7OC(CC7OP(=S)(O)OCC8OC(CC8OP(=S)(O)OCC9OC(CC9OP(=S)(O)OC
C%10OC(CC%10OP(=S)(O)OCC%11OC(CC%11OP(=S)(O)OCC%12OC(CC%12OP
(=S)(O)OCC%13OC(CC%13OP(=S)(O)OCC%14OC(CC%14OP(=S)(O)OCC%15O
C(CC%15OP(=S)(O)OCC%16OC(CC%16O)N%17C=NC%18=C%17N=C(N)NC%18=
O)N%19C=C(C)C(=O)NC%19=O)N%20C=Nc%21c(N)ncnc%20%21)N%22C=Nc%
23c(N)ncnc%22%23)N%24C=NC%25=C%24N=C(N)NC%25=O)N%26C=C(C)C(=
O)NC%26=O)N%27C=C(C)C(=O)NC%27=O)N%28C=C(C)C(=O)NC%28=O)N%29
C=Nc%30c(N)ncnc%29%30)N%31C=CC(N)=NC%31=O)N%32C=CC(N)=NC%32=
O)N%33C=Nc%34c(N)ncnc%33%34)N%35C=Nc%36c(N)ncnc%35%36)N%37C=
Nc%38c(N)ncnc%37%38)N%39C=CC(N)=NC%39=O)N%40C=NC%41=C%40N=C(
N)NC%41=O)OC%42CC(OC%42COP(=S)(O)OC%43CC(OC%43COP(=S)(O)OC%4
4CC(OC%44COP(=S)(O)OC%45CC(OC%45CO)N%46C=NC%47=C%46N=C(N)NC%
47=O)N%48C=CC(N)=NC%48=O)N%49C=Nc%50c(N)ncnc%49%50)N%51C=NC%
52=C%51N=C(N)NC%52=O

pdb file: 595137.pdb
sdf file: 595137.sdf

Please note: images may show incorrect connectivity due to improper geometry. We will be working to improve this situation. For now, the left image should be correct, and the other two are correct, if they match the first.

Image Links

124630-95-1-balls.png

124630-95-1-rods.png

595137.png

Molecule Name Links

124630-95-1

5-GCAGGCAAACCATTTGAATG-3

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PubChem Fields

pubchem total charge: 0
pubchem substance id: 596339
pubchem substance version: 3
pubchem ext datasource name: NIAID
pubchem ext datasource regid: 000496
pubchem substance comment: NIAID - Anti-HIV/OI Chemical Compound Database NUCLEOTIDES, ANTISENSE OLIGO PHOSPHOROTHIOATES
pubchem substance synonym: 124630-95-1 5'-GCAGGCAAACCATTTGAATG-3' 5'-GCAGGCAAACCATTTGAATG-3' Phosphorothioate (scrambled oligonucleotide) 5'-GCAGGCAAACCATTTGAATG-3' Phosphorothioate oligodeoxynucleotide (mismatched) AIDS-000496 AIDS000496 Guanosine, 2'-deoxy-P-thioguanylyl-(3'-5')-2'-deoxy-P-thiocytidylyl-(3'-5')-2'-deoxy-P-thioadenylyl-(3'-5')-2'-deoxy-P-thioguanylyl-(3'-5')-2'-deoxy-P-thioguanylyl-( 3'-5')-2'-deoxy-P-thiocytidylyl-(3'-5')-2'-deoxy-P-thioadenylyl-(3'-5')-2'-deoxy-P-thioadenylyl-(3'-5')-2'-deoxy-P-thioadenylyl-(3'-5')-2'-deoxy-P-thiocyt idylyl-(3'-5)-2'-deoxy-P-thiocytidylyl-(3'-5')-2'-deoxy-P-thioadenylyl-(3'-5')-P-thiothymidylyl-(3'-5')-P-thiothymidylyl-(3'-5')-P-thiothymidylyl-(3'-5')- 2'-deoxy-P-thioguanylyl-(3'-5')-2'-deoxy-P-thioadenylyl-(3'-5')-2'-deoxy-P-thioadenylyl-(3'-5')-P-thiothymidylyl-(3'-5')-2'-deoxy
pubchem generic registry name: 124630-95-1
pubchem xref ext id: 000496 AIDS000496
pubchem pubmed id: 2682627
pubchem ext datasource url: http://chemdb.niaid.nih.gov/struct_search/an/an_search.htm
pubchem ext substance url: http://chemdb.niaid.nih.gov/struct_search/all/url_search.asp?aids_no=000496
pubchem cid associations: 16133914 1

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