00600001_00625000/600480 Index

600480 5'-dC sC sC sC sC sC sC sC sC sC sC sC sC sC-3' AIDS-004818
AIDS004818 Deoxycytidine phosphorothioate 14 mer oligonucleo
tide, [S(dC)14] S(dC)14 S-dC14

Smiles: S=P(O)(OCC1OC(CC1OP(=S)(O)OCC2OC(CC2OP(=S)(O)OCC3OC(CC3OP(=S
)(O)OCC4OC(CC4OP(=S)(O)OCC5OC(CC5OP(=S)(O)OCC6OC(CC6OP(=S)(O
)OCC7OC(CC7O)N8C=CC(N)=NC8=O)N9C=CC(N)=NC9=O)N%10C=CC(N)=NC%
10=O)N%11C=CC(N)=NC%11=O)N%12C=CC(N)=NC%12=O)N%13C=CC(N)=NC%
13=O)N%14C=CC(N)=NC%14=O)OC%15CC(OC%15COP(=S)(O)OC%16CC(OC%1
6COP(=S)(O)OC%17CC(OC%17COP(=S)(O)OC%18CC(OC%18COP(=S)(O)OC%
19CC(OC%19COP(=S)(O)OC%20CC(OC%20COP(=S)(O)OC%21CC(OC%21CO)N
%22C=CC(N)=NC%22=O)N%23C=CC(N)=NC%23=O)N%24C=CC(N)=NC%24=O)N
%25C=CC(N)=NC%25=O)N%26C=CC(N)=NC%26=O)N%27C=CC(N)=NC%27=O)N
%28C=CC(N)=NC%28=O

pdb file: 600480.pdb
sdf file: 600480.sdf

Please note: images may show incorrect connectivity due to improper geometry. We will be working to improve this situation. For now, the left image should be correct, and the other two are correct, if they match the first.

Image Links

5-dC-balls.png

5-dC-rods.png

600480.png

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PubChem Fields

pubchem total charge: 0
pubchem substance id: 600482
pubchem substance version: 3
pubchem ext datasource name: NIAID
pubchem ext datasource regid: 004818
pubchem substance comment: NIAID - Anti-HIV/OI Chemical Compound Database NUCLEOTIDES, OLIGO PHOSPHOROTHIOATES
pubchem substance synonym: 5'-dC sC sC sC sC sC sC sC sC sC sC sC sC sC-3' AIDS-004818 AIDS004818 Deoxycytidine phosphorothioate 14 mer oligonucleotide, [S(dC)14] S(dC)14 S-dC14
pubchem xref ext id: 004818 AIDS004818
pubchem pubmed id: 1380799 3499613
pubchem ext datasource url: http://chemdb.niaid.nih.gov/struct_search/an/an_search.htm
pubchem ext substance url: http://chemdb.niaid.nih.gov/struct_search/all/url_search.asp?aids_no=004818
pubchem cid associations: 16130111 1

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