00600001_00625000/601020 Index

601020 AIDS-005363 AIDS005363 MR-20 Oligonucleotide-lipophilic grou
p Monopalmitoyl propylene diamine conjugated oligonucleotide
(pTGCCTGGAGCTGCTTGATGC)

Smiles: P(=O)(O)(OCC1OC(CC1OP(=O)(O)OCC2OC(CC2OP(=O)(O)OCC3OC(CC3OP(
=O)(O)OCC4OC(CC4OP(=O)(O)OCC5OC(CC5OP(=O)(O)OCC6OC(CC6OP(=O)
(O)OCC7OC(CC7OP(=O)(O)OCC8OC(CC8OP(=O)(O)OCC9OC(CC9OP(=O)(O)
OCC%10OC(CC%10OP(=O)(O)OCC%11OC(CC%11OP(=O)(O)OCC%12OC(CC%12
OP(=O)(O)OCC%13OC(CC%13OP(=O)(O)OCC%14OC(CC%14O)N%15C=CC(N)=
NC%15=O)N%16C=NC%17=C%16N=C(N)NC%17=O)N%18C=C(C)C(=O)NC%18=O
)N%19C=Nc%20c(N)ncnc%19%20)N%21C=NC%22=C%21N=C(N)NC%22=O)N%2
3C=C(C)C(=O)NC%23=O)N%24C=C(C)C(=O)NC%24=O)N%25C=CC(N)=NC%25
=O)N%26C=NC%27=C%26N=C(N)NC%27=O)N%28C=C(C)C(=O)NC%28=O)N%29
C=CC(N)=NC%29=O)N%30C=NC%31=C%30N=C(N)NC%31=O)N%32C=Nc%33c(N
)ncnc%32%33)N%34C=NC%35=C%34N=C(N)NC%35=O)OC%36CC(OC%36COP(=
O)(O)OC%37CC(OC%37COP(=O)(O)OC%38CC(OC%38COP(=O)(O)OC%39CC(O
C%39COP(=O)(O)OC%40CC(OC%40COP(=O)(O)OC%41CC(OC%41COP(=O)(O)
NCCCNC(=O)CCCCCCCCCCCCCCC)N%42C=C(C)C(=O)NC%42=O)N%43C=NC%44
=C%43N=C(N)NC%44=O)N%45C=CC(N)=NC%45=O)N%46C=CC(N)=NC%46=O)N
%47C=C(C)C(=O)NC%47=O)N%48C=NC%49=C%48N=C(N)NC%49=O

pdb file: 601020.pdb
sdf file: 601020.sdf

Please note: images may show incorrect connectivity due to improper geometry. We will be working to improve this situation. For now, the left image should be correct, and the other two are correct, if they match the first.

Image Links

601020.png

AIDS-005363-balls.png

AIDS-005363-rods.png

Molecule Name Links

Oligonucleotide-lipophilic

conjugated

diamine

group

oligonucleotidepTGCCTGGAGCTGCTTGATGC

propylene

More coming soon!

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PubChem Fields

pubchem total charge: 0
pubchem substance id: 601023
pubchem substance version: 3
pubchem ext datasource name: NIAID
pubchem ext datasource regid: 005363
pubchem substance comment: NIAID - Anti-HIV/OI Chemical Compound Database NUCLEOTIDES, OLIGO
pubchem substance synonym: AIDS-005363 AIDS005363 MR-20 Oligonucleotide-lipophilic group Monopalmitoyl propylene diamine conjugated oligonucleotide(pTGCCTGGAGCTGCTTGATGC)
pubchem xref ext id: 005363 AIDS005363
pubchem pubmed id: 8504177
pubchem ext datasource url: http://chemdb.niaid.nih.gov/struct_search/an/an_search.htm
pubchem ext substance url: http://chemdb.niaid.nih.gov/struct_search/all/url_search.asp?aids_no=005363
pubchem cid associations: 16130143 1

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