sphing Molecules Structural Archive and Gallery

C12126 Dihydroceramide N-Acylsphinganine

4-D-Hydroxysphinganine 554-62-1 C12144 Phytosphingosine
pdb file: 13569.pdb
sdf file: 13569.sdf
directory: 13569

C12145 Ceramide II N-Acyl-4-hydroxysphinganine Phytoceramide
pdb file: 13570.pdb
sdf file: 13570.sdf
directory: 13570

C00195 Ceramide N-Acylsphingosine
pdb file: 3442.pdb
sdf file: 3442.sdf
directory: 3442

123-78-4 C00319 Sphing-4-enine Sphingenine Sphingoid Sphingosine
pdb file: 3558.pdb
sdf file: 3558.sdf
directory: 3558

C00550 Sphingomyelin
pdb file: 3774.pdb
sdf file: 3774.sdf
directory: 3774

2-Amino-1,3-dihydroxyoctadecane 764-22-7 C00836 Dihydrosphingosine Sphinganine
pdb file: 4032.pdb
sdf file: 4032.sdf
directory: 4032

19794-97-9 C01120 Dihydrosphingosine 1-phosphate Sphinganine 1-phosphate
pdb file: 4287.pdb
sdf file: 4287.sdf
directory: 4287

C01190 D-Glucosyl-N-acylsphingosine Glucocerebroside Glucosylceramide
pdb file: 4349.pdb
sdf file: 4349.sdf
directory: 4349

2238-90-6 C01747 Galactosylsphingosine O-Galactosylsphingosine Psychosine
pdb file: 4801.pdb
sdf file: 4801.sdf
directory: 4801

C02686 Cerebroside D-Galactosyl-N-acylsphingosine D-Galactosylceramide Galactocerebroside Galactosylceramide
pdb file: 5554.pdb
sdf file: 5554.sdf
directory: 5554

3-Dehydro-D-sphinganine 3-Dehydrosphinganine C02934
pdb file: 5751.pdb
sdf file: 5751.sdf
directory: 5751

C03108 D-Glucosylsphingosine
pdb file: 5896.pdb
sdf file: 5896.sdf
directory: 5896

C03640 Sphingosyl-phosphocholine
pdb file: 6297.pdb
sdf file: 6297.sdf
directory: 6297

C03701 Glycosyl-N-acylsphingosine
pdb file: 6344.pdb
sdf file: 6344.sdf
directory: 6344

2-(2-Hydroxyacyl)sphingosine C03823
pdb file: 6435.pdb
sdf file: 6435.sdf
directory: 6435

C03858 D-Glucosyldihydrosphingosine
pdb file: 6462.pdb
sdf file: 6462.sdf
directory: 6462

1-(beta-D-Galactosyl)-2-(2-hydroxyacyl)sphingosine C04708
pdb file: 7112.pdb
sdf file: 7112.sdf
directory: 7112

C04753 D-Galactosyl-D-galactosyl-D-glucosyl-N-acylsphingosine
pdb file: 7153.pdb
sdf file: 7153.sdf
directory: 7153

C04911 D-Galactosyl-1,3-beta-N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosyl-N-acylsphingosine D-Galactosyl-N-acetyl-D-galactosaminyl-(N-acetylneuraminyl)-D-galactosyl-D-glucosylceramide GM1 GM1a Gal-beta1-
pdb file: 7282.pdb
sdf file: 7282.sdf
directory: 7282

3-Ketosphingosine C06121
pdb file: 8155.pdb
sdf file: 8155.sdf
directory: 8155

C06124 Sphing-4-enine 1-phosphate Sphingosine 1-phosphate
pdb file: 8157.pdb
sdf file: 8157.sdf
directory: 8157

22002-83-1 2238-90-6 33763-05-2 Galactosylsphingosine PSYCHOSINE Sphingosine galactoside beta-D-Galactopyranoside, 2-amino-3-hydroxy-4-octadecenyl, (R-(R*,S*-(E)))-
pdb file: 159936.pdb
sdf file: 159936.sdf
directory: 159936

(-)-threo-Dihydrosphingosine (2S,3S)-2-Amino-1,3-octadecanediol 1,3-Octadecanediol, 2-amino-, (2S,3S)- 1,3-Octadecanediol, 2-amino-, (S-(R*,R*))- 1,3-Octadecanediol, 2-amino-, L-threo- 15639-50-6 L-(-)-threo-Sphingnine L-threo-2-Amino-1,3-octadecanediol SAFINGOL SPC 100270 Safingol [USAN:INN]
pdb file: 170018.pdb
sdf file: 170018.sdf
directory: 170018

(E)-2-Amino-4-octadecan-1,3-diol 123-78-4 2-Aminooctadec-4-ene-1,3-diol 4-Octadecene-1,3-diol, 2-amino-, (R-(R*,S*-(E)))- CCRIS 6899 EINECS 204-651-3 SPHINGOSINE
pdb file: 173314.pdb
sdf file: 173314.sdf
directory: 173314

1,3-Octadecanediol, 2-amino- (2S,3S) 15639-50-6 2S,3S-Dihydrosphingosine NSC714503 Safingol
pdb file: 532489.pdb
sdf file: 532489.sdf
directory: 532489

AIDS-031552 AIDS031552 BHAP analog Sphingosine deriv. [R-[R*,S*-(E)]]-N-[2-Hydroxy-1-(hydroxymethyl)-3-heptadecenyl]-N'-[2-[[4-[3-[(1-methylethyl)amino]-2-pyridinyl]-1-piperazinyl]carbonyl]-1H-indol-5-yl]butanediamide
pdb file: 614004.pdb
sdf file: 614004.sdf
directory: 614004

AIDS-031553 AIDS031553 BHAP analog Sphingosine deriv. [R-[R*,S*-(E)]]-N-[2-Hydroxy-1-(hydroxymethyl)-3-heptadecenyl]-N'-[2-[[4-[3-[(1-methylethyl)amino]-2-pyridinyl]-1-piperazinyl]carbonyl]-1H-indol-5-yl]hexanediamide
pdb file: 614005.pdb
sdf file: 614005.sdf
directory: 614005

AIDS-031554 AIDS031554 BHAP analog Sphingosine deriv. [R-[R*,S*-(E)]]-N-[2-Hydroxy-1-(hydroxymethyl)-3-heptadecenyl]-N'-[2-[[4-[3-[(1-methylethyl)amino]-2-pyridinyl]-1-piperazinyl]carbonyl]-1H-indol-5-yl]decanediamide
pdb file: 614006.pdb
sdf file: 614006.sdf
directory: 614006

AIDS-031555 AIDS031555 BHAP analog Sphingosine deriv. [R-[R*,S*-(E)]]-N-[2-Hydroxy-1-(hydroxymethyl)-3-heptadecenyl]-4-[2-[[4-[3-[(1-methylethyl)amino]-2-pyridinyl]-1-piperazinyl]carbonyl]-1H-indol-5-yl]oxy]butanamide
pdb file: 614007.pdb
sdf file: 614007.sdf
directory: 614007

AIDS-031556 AIDS031556 BHAP analog Sphingosine deriv. [R-[R*,S*-(E)]]-N-[2-Hydroxy-1-(hydroxymethyl)-3-heptadecenyl]-6-[2-[[4-[3-[(1-methylethyl)amino]-2-pyridinyl]-1-piperazinyl]carbonyl]-1H-indol-5-yl]oxy]hexanamide
pdb file: 614008.pdb
sdf file: 614008.sdf
directory: 614008

(3S,5S,2R,4R,14R)-2-Amino-3,4,5,14-tetrahydroxyicos-6-enoic acid AIDS-097207 AIDS097207 Stereoisomer of sphingofungin B
pdb file: 640056.pdb
sdf file: 640056.sdf
directory: 640056

(2S,3S,5S,4R,14R)-2-Amino-3,4,5,14-tetrahydroxyicos-6-enoic acid AIDS-097208 AIDS097208 Stereoisomer of sphingofungin B
pdb file: 640057.pdb
sdf file: 640057.sdf
directory: 640057

(2S,5S,3R,4R,14R)-2-Amino-3,4,5,14-tetrahydroxyicos-6-enoic acid 121025-45-4 AIDS-097209 AIDS097209 Sphingofungin B
pdb file: 640058.pdb
sdf file: 640058.sdf
directory: 640058

(5S,2R,3R,4R,14R)-2-Amino-3,4,5,14-tetrahydroxyicos-6-enoic acid AIDS-097210 AIDS097210 Stereoisomer of sphingofungin B
pdb file: 640059.pdb
sdf file: 640059.sdf
directory: 640059

(2S,5S,3R,4R)-2-Amino-3,4,5-trihydroxyicos-6-enoic acid AIDS-097211 AIDS097211 Stereoisomer of sphingofungin B
pdb file: 640060.pdb
sdf file: 640060.sdf
directory: 640060

(2S,5S,14S,3R,4R)-2-Amino-3,4,5,14-tetrahydroxyicos-6-enoic acid AIDS-097212 AIDS097212 Stereoisomer of sphingofungin B
pdb file: 640061.pdb
sdf file: 640061.sdf
directory: 640061

(2S,3S,4S,5R,14RS)-2-Amino-3,4,5,14-tetrahydroxyeicos-6-enoic acid AIDS-097213 AIDS097213 Stereoisomer of sphingofungin B
pdb file: 640062.pdb
sdf file: 640062.sdf
directory: 640062

(2S,3R,4S,5R,14RS)-2-Amino-3,4,5,14-tetrahydroxyeicos-6-enoic acid AIDS-097214 AIDS097214 Stereoisomer of sphingofungin B
pdb file: 640063.pdb
sdf file: 640063.sdf
directory: 640063

(R-(R*,S*))-2-Aminooctadecane-1,3-diol 1,3-Octadecanediol, 2-amino-, (2S,3R)- 1,3-Octadecanediol, 2-amino-, (R-(R*,S*))- 1,3-Octadecanediol, 2-amino-, D-erythro- 764-22-7 C18-Dihydrosphingosine C18-Sphingosine, dihydro- D-erythro-1,3-Dihydroxy-2-aminooctadecane D-erythro-2-Amino-1,3-octadecanediol D-erythro-C18-Dihydrosphingosine D-erythro-Sphinganine Dihydro-C18-sphingosine EINECS 212-116-0 Octadecasphinganine SPC 102860 Safingol (erythreo) Sphinganine
pdb file: 668230.pdb
sdf file: 668230.sdf
directory: 668230

26993-30-6 26993-39-5 4-Octadecene-1,3-diol, 2-amino-, 1-(dihydrogen phosphate), (2S,3R,4E)- 4-Octadecene-1,3-diol, 2-amino-, 1-(dihydrogen phosphate), (R-(R*,S*-(E)))- Sphingosine 1-phosphate Sphingosine-1-phosphate
pdb file: 682546.pdb
sdf file: 682546.sdf
directory: 682546

10216-23-6 Ethanaminium, 2-((((2-amino-3-hydroxy-4-octadecenyl)oxy)hydroxyphosphinyl)oxy)-N,N,N-trimethyl-, chloride, (R-(R*,S*-(E)))- Lysosphingomyelin Sphingosine phosphorylcholine Sphingosylphosphocholine Sphingosylphosphorylcholine
pdb file: 691691.pdb
sdf file: 691691.sdf
directory: 691691

122314-67-4 4-Octadecene-1,3-diol, 2-(dimethylamino)-, (S-(R*,S*-(E)))- N,N-DMS N,N-Dimethylsphingosine
pdb file: 696291.pdb
sdf file: 696291.sdf
directory: 696291

1,3,4-Octadecanetriol, 2-amino-, (2S-(2R*,3R*,4S*))- 33511-66-9 4-D-Hydroxysphinganine 554-62-1 phytosphingosine
pdb file: 698639.pdb
sdf file: 698639.sdf
directory: 698639

86701-10-2 C6-Nbd-cer C6-Nbd-ceramide Hexanamide, N-(2-hydroxy-1-(hydroxymethyl)-3-heptadecenyl)-6-((7-nitro-4-benzofurazanyl)amino)- N-(7-(4-nitrobenzo-2-oxa-1,3-diazole))-6-aminocaproyl sphingosine Nbd-ceramide
pdb file: 700718.pdb
sdf file: 700718.sdf
directory: 700718

151729-53-2 4-Octadecene-1,3-diol, 2-(dimethylamino)-, 1-(dihydrogen phosphate), (R-(R*,S*-(E)))- Dms-1-P N,N-Dimethylsphingosine-1-phosphate
pdb file: 704449.pdb
sdf file: 704449.sdf
directory: 704449

102489-95-2 Glu-hodds Glucosyl-N-(2-hydroxyoctadecanoyl)dihydrosphingosine
pdb file: 704725.pdb
sdf file: 704725.sdf
directory: 704725

103348-49-8 2-Azido-4-octadecen-1,3-diol 2-Azidosphingosine
pdb file: 704972.pdb
sdf file: 704972.sdf
directory: 704972

121025-44-3 6-Eicosenoic acid, 2-((aminoiminomethyl)amino)-3,4,5,14-tetrahydroxy- Sphingofungin A
pdb file: 705885.pdb
sdf file: 705885.sdf
directory: 705885

121025-45-4 6-Eicosenoic acid, 2-amino-3,4,5,14-tetrahydroxy- Sphingofungin B
pdb file: 705886.pdb
sdf file: 705886.sdf
directory: 705886

121025-46-5 6-Eicosenoic acid, 5-(acetyloxy)-2-amino-3,4,14-trihydroxy- Sphingofungin C
pdb file: 705889.pdb
sdf file: 705889.sdf
directory: 705889

121025-47-6 6-Eicosenoic acid, 2-(acetylamino)-3,4,5,14-tetrahydroxy- Sphingofungin D
pdb file: 705891.pdb
sdf file: 705891.sdf
directory: 705891

111682-15-6 12-(1-Pyrenedodecanoyl)sphingosylgalactosyl-O-3-sulfate Dodecanamide, N-(1-((beta-D-galactopyranosyloxy)methyl)-2-(sulfooxy)-3-heptadecenyl)-12-(1-pyrenyl)-, (R-(R*,S*-(E)))- P12 Sulfatide
pdb file: 707167.pdb
sdf file: 707167.sdf
directory: 707167

(R-(R*,S*-(E)))-2-Amino-3-hydroxy-4-octadecenyl 4-O-beta-D-galactopyranosyl-beta-D-glucopyranoside 109785-20-8 Lactosyl lysosphingolipid Lactosyllysosphingolipid beta-D-Glucopyranoside, 2-amino-3-hydroxy-4-octadecenyl 4-O-beta-D-galactopyranosyl-, (R-(R*,S*-(E)))-
pdb file: 707492.pdb
sdf file: 707492.sdf
directory: 707492

133733-41-2 3,5-Dioxa-8-aza-4-phosphanonadecan-1-aminium, 4-hydroxy-7-(1-hydroxy-2-hexadecenyl)-N,N,N-trimethyl-9-oxo-19-((1-pyrenylsulfonyl)amino)-, hydroxide, inner salt, 4-oxide, (R-(R*,S*-(E)))- 4-Hydroxy-7-(1-hydroxy-2-hexadecenyl)-N,N,N-trimethyl-9-oxo-19-((1-pyrenylsulfonyl)amino)-3,5-dioxa-8-aza-4-phosphanonadecan-1-aminium hydroxide, inner salt, 4-oxide, (R-(R*,S*-(E)))- N-(11-(1-Pyrene)sulfonylaminoundecanoyl)sphingomyelin Psa11-spm
pdb file: 708059.pdb
sdf file: 708059.sdf
directory: 708059

133733-42-3 3,5-Dioxa-8-aza-4-phosphaundec-10-en-1-aminium, 4-hydroxy-7-(1-hydroxy-2-hexadecenyl)-N,N,N-trimethyl-9-oxo-11-(1-pyrenyl)-, hydroxide, inner salt, 4-oxide, (R-(R*,S*-(Z,E)))- 4-Hydroxy-7-(1-hydroxy-2-hexadecenyl)-N,N,N-trimethyl-9-oxo-11-(1-pyrenyl)-3,5-dioxa-8-aza-4-phosphaundec-10-en-1-aminium hydroxide, inner salt, 4-oxide, (R-(R*,S*-(Z,E)))- N-(3-(1-Pyrene)propenoyl)sphingomyelin P3,1-Spm
pdb file: 708060.pdb
sdf file: 708060.sdf
directory: 708060

138686-73-4 4-Octen-2-aminium, 1,3-dihydroxy-N,N,N-trimethyl-, (R-(R*,S*-(E)))- N,N,N-Tms N,N,N-Trimethylsphingosine
pdb file: 708530.pdb
sdf file: 708530.sdf
directory: 708530

145401-47-4 6-Eicosenoic acid, 2-amino-3,4,5-trihydroxy-2-(hydroxymethyl)-14-oxo- Sphingofungin E
pdb file: 709029.pdb
sdf file: 709029.sdf
directory: 709029

145401-48-5 6-Eicosenoic acid, 2-amino-3,4,5-trihydroxy-2-methyl-14-oxo- Sphingofungin F
pdb file: 709030.pdb
sdf file: 709030.sdf
directory: 709030

1-Naphthalenesulfonamide, 5-(dimethylamino)-N-(1-((beta-D-glucopyranosyloxy)methyl)-2-hydroxy-3-heptadecenyl)-, (S-(R*,S*-(E)))- 1-O-Glucosyl-2-N-(dimethylaminonaphthalene-5-sulfonyl)sphingosine 1-O-Glucosyl-2-dansylsphingosine 82535-65-7
pdb file: 710186.pdb
sdf file: 710186.sdf
directory: 710186

3102-57-6 Acetamide, N-(2-hydroxy-1-(hydroxymethyl)-3-heptadecenyl)-, (R-(R*,S*-(E)))- N-acetylsphingosine
pdb file: 710767.pdb
sdf file: 710767.sdf
directory: 710767

1-O-Galactosyl-2-N-(6-(2-anthroyl)hexanoyl)-4-sphingenine 2-Anthracenehexanamide, N-(1-((beta-D-galactopyranosyloxy)methyl)-2-hydroxy-3-heptadecenyl)-, (R-(R*,S*-(E)))- 93620-54-3 Gal-AH-sphingenin
pdb file: 724491.pdb
sdf file: 724491.sdf
directory: 724491

3,5-Dioxo-8-aza-4-phosphatetradecan-1-aminium, 4-hydroxy-7-(1-hydroxy-2-hexadecenyl)-N,N,N-trimethyl-14-((7-nitro-4-benzofurazanyl)amino)-9-oxo-, hydroxide, inner salt, 4-oxide, (R-(R*,S*-(E)))- 4-Hydroxy-7-(1-hydroxy-2-hexadecenyl)-N,N,N-trimethyl-14-((7-nitro-4-benzofurazanyl)amino)-9-oxo-3,5-dioxo-8-aza-4-phosphatetradecan-1-aminium hydroxide, inner salt, 4-oxide, (R-(R*,S*-(E)))- 94885-04-8 C6-Nbd-SM N-(N-(7-Nitro-2,1,3-benzoxadiazol-4-yl)-epsilon-aminohexanoyl)sphingosylphosphorylcholine
pdb file: 724580.pdb
sdf file: 724580.sdf
directory: 724580

4201-58-5 C16-0(Palmitoyl)ceramide Hexadecanamide, N-(2-hydroxy-1-(hydroxymethyl)-3-heptadecenyl)-, (R*,S*-(E))- N-Palmitoylsphingosine Nfa(C16)cer
pdb file: 728731.pdb
sdf file: 728731.sdf
directory: 728731

1-Hydroxy-2-amino-3-oxo-octadecane 16105-69-4 17666-24-9 3-Ketosphinganine 3-Octadecanone, 2-amino-1-hydroxy- Ketodihydrosphingosine
pdb file: 729664.pdb
sdf file: 729664.sdf
directory: 729664

1,3-Octadecanediol, 2-amino-, 1-(dihydrogen phosphate), (R-(R*,S*))- 19794-97-9 Dihydrosphingosine 1-phosphate Dihydrosphingosine-1-phosphate Sphinganine 1-phosphate
pdb file: 729804.pdb
sdf file: 729804.sdf
directory: 729804

118578-43-1 3,5-Dioxa-8-aza-4-phosphaeicosan-1-aminium, 4-hydroxy-7-(1-hydroxy-2-pentadecenyl)-N,N,N-trimethyl-9-oxo-20-((1-pyrenylsulfonyl)amino)-, hydroxide, inner salt, 4-oxide, (R-(R*,S*-(E)))- N-(12-((1-Pyrenesulfonyl)amido)dodecanoyl)sphingosylphosphorylcholine Psa12-spm
pdb file: 741514.pdb
sdf file: 741514.sdf
directory: 741514

52050-17-6 Glucopsychosine Glucosyl psychosine Glucosyl sphingosine Sphingosyl beta-glucoside beta-D-Glucopyranoside, 2-amino-3-hydroxy-4-octadecenyl, (R-(R*,S*-(E)))-
pdb file: 748637.pdb
sdf file: 748637.sdf
directory: 748637

17574-05-9 2-Amino-3-hydroxy-4-octadecenyl 4-O-beta-D-galactopyranosyl-alpha-D-glucopyranoside (E) Lactosylsphingosine
pdb file: 766547.pdb
sdf file: 766547.sdf
directory: 766547

34324-89-5 Hexadecanamide, N-(1-((beta-D-galactopyranosyloxy)methyl)-2-hydroxy-3-heptadecenyl)-, (R-(R*,S*-(E)))- N-Palmitoylgalactosylsphingosine N-Palmitoylpsychosine NPGS NPoGS
pdb file: 766598.pdb
sdf file: 766598.sdf
directory: 766598

3-Octadecenamide, N-(1-((beta-D-glucopyranosyloxy)methyl)-2-hydroxy-8-methyl-3,7-heptadecadienyl)-2-hydroxy-, (1S-(1R*(2S*,3E),2S*,3Z))- 70711-60-3 N-2'-Hydroxy-3'-trans-octadecenoyl-1-o-beta-D-glucosyl-9-methyl-cis-4,x-8-sphingadienine
pdb file: 769369.pdb
sdf file: 769369.sdf
directory: 769369

1,3-Decanediol, 2-amino-, (R*,S*)-(+-)- 70849-41-1 Decasphinganine
pdb file: 769374.pdb
sdf file: 769374.sdf
directory: 769374

1-Desoxysphinganine-1-phosphonate 56816-63-8 Dihydrosphingosine-1-phosphonate Phosphonic acid, (2-amino-3-hydroxyoctadecyl)-, (R-(R*,R*))-
pdb file: 771375.pdb
sdf file: 771375.sdf
directory: 771375

108392-10-5 N-Oleoyl-sphingomyelin N-Oleoylsphingomyelin
pdb file: 772090.pdb
sdf file: 772090.sdf
directory: 772090

128376-90-9 Mxmgcer O-Mannopyranosyl-(1-3)-O-xylopyranosyl-(1-2)-O-mannopyranosyl-(1-4)-O-glucopyranosyl-(1-1)-2-N-tetracosanoylsphingenine alpha-D-Manp-(1-3)-beta-D-xylp-(1-2)-beta-D-manp-(1-4)-beta-D-glcp-(1-1)-cer
pdb file: 772829.pdb
sdf file: 772829.sdf
directory: 772829

128443-10-7 Mmgcer O-Mannopyranosyl-(1-3)-O-mannopyranosyl-(1-4)-O-glucopyranosyl-(1-1)-2-N-tetracosanoylsphingenine alpha-D-Manp-(1-3)-beta-D-manp-(1-4)-beta-D-glcp-(1-1)-cer
pdb file: 772835.pdb
sdf file: 772835.sdf
directory: 772835

1-O-Glucopyranosyl-2-N-(2'-hydroxypalmitoyl)octadecasphinga-4,8-dienine 114297-20-0 Hexadecanamide, N-(1-((beta-D-glucopyranosyloxy)methyl)-2-hydroxy-3,7-heptadecadienyl)-2-hydroxy-, (1S-(1R*(S*),2S*,3E,7E))- Soya-cerebroside I
pdb file: 773903.pdb
sdf file: 773903.sdf
directory: 773903

1-O-Galactopyranosyl-N-(10-(1-pyrene-9-enedecanoyl)sphingosine) 137593-41-0 Pyrgalcer
pdb file: 774090.pdb
sdf file: 774090.sdf
directory: 774090